2026
Compaction of Chromatin Domains Regulates Target Search Times of Proteins
PLoS Computational Biology, Accepted (2026) DOI
2025
COMET-LF: a compartmental model of dynamics of infection, disease, and elimination strategies for lymphatic filariasis
BMC Infectious Diseases, 25(1), 1-16 (2025) DOI
The Role of Lamins in Genome Organisation: A Modelling Perspective
Lamins in Genome Organization and Diseases, 201 (2025) DOI
Navigating the Multiverse: a Hitchhiker's guide to selecting harmonization methods for multimodal biomedical data
Biology Methods and Protocols, 10(1), bpaf028 (2025) DOI
Liquid–liquid phase separation of lamin drives altered chromatin organization in cardiomyopathic mutations of lamin A
Nucleic Acids Research, 53(14), gkaf615 (2025) DOI
2024
Theoretical analysis of cargo transport by catch bonded motors in optical trapping assays
Soft Matter, 20(3), 566-577 (2024) DOI
Nature of barriers determines first passage times in heterogeneous media
Soft Matter, 20 (42), 8353-8362 (2024) DOI
2023
Multivalent binding proteins can drive collapse and reswelling of chromatin in confinement
Soft Matter, 19(1), 153-163 (2023) DOI
Predicting scale-dependent chromatin polymer properties from systematic coarse-graining
Nature Communications, 14(1), 4108 (2023) DOI
Dynamic modelling predicts lactate and IL-1β as interventional targets in metabolic-inflammation-clock regulatory loop in glioma
Integrative Biology, 15, zyad008 (2023) DOI
Anomalous diffusion of E. coli under microfluidic confinement and chemical gradient
Soft Matter, 19(34), 6446 (2023) DOI
Unequal Lives: A Sociodemographic Analysis of COVID-19 Transmission and Mortality in India
Public Health, 214, 133-139 (2023) DOI
2022
Pseudocleavage furrows restrict plasma membrane-associated PH domain in syncytial Drosophila embryos
Biophysical Journal, 121(12), 2419-2435 (2022) DOI
2021
Novel mechanism for oscillations in catchbonded motor-microtubule complexes
Biophysical Journal, 120(18), 4129-4136 (2021) DOI
2020
Cyto-architecture constrains a photoactivation induced tubulin gradient in the syncytial Drosophila embryo
The International Journal of Developmental Biology, 64, 285-297 (2020) DOI
A Lamin-Associated Chromatin Model for Chromosome Organization
Biophysical Journal, 118(12), 3041-3050 (2020) DOI
An India-specific compartmental model for Covid-19: projections and intervention strategies by incorporating geographical, Infrastructural and response heterogeneity
arXiv preprint arXiv:2007.14392 (2020) DOI
The accidental ally: Nucleosomal barriers can accelerate cohesin mediated loop formation in chromatin
Biophysical Journal, 119(11), 2316-2325 (2020) DOI
Capturing complexity: Challenges in modelling COVID-19 in India
Indian Academy of Sciences Conference Series, 3(1), 189-191 (2020) DOI
2019
Dynein catch bond as a mediator of codependent bidirectional cellular transport
Physical Review Research, 1(2), 023019 (2019) DOI
2018
Reprogramming, oscillations and transdifferentiation in epigenetic landscapes
Scientific Reports, 8(1), 7358 (2018) DOI
Diffusion dynamics and steady states of systems of hard rods on a square lattice
Physical Review E, 97(2), 022108 (2018) DOI
2016
Effect of catch bonding on transport of cellular cargo by dynein motors
Physical Review E, 94, 032403 (2016) DOI
2014
Delayed self-regulation and time-dependent chemical drive leads to novel states in epigenetic landscapes
Journal of The Royal Society Interface, 11(100), 20140706 (2014) DOI
Boundary induced phase transition with stochastic entrance and exit
Journal of Statistical Mechanics: Theory and Experiment, 2014(10), P10019 (2014) DOI
2013 and Earlier
Theory of volume transition in polyelectrolyte gels with charge regularization
The Journal of Chemical Physics, 136(13), 134901 (2012) DOI
Thermodynamic behaviour of two-dimensional vesicles revisited
The European Physical Journal E, 35(4), 1-8 (2012) DOI
Theory of volume transitions in polyelectrolyte gels
MRS Online Proceedings Library Archive, 1418 (2012) DOI
Monte Carlo study of the molecular mechanisms of surface-layer protein self-assembly
The Journal of Chemical Physics, 134(12), 03B616 (2011) DOI
Long-time growth kinetics of first order phase transitions in the presence of a boundary layer
The Journal of Chemical Physics, 134(4), 044901 (2011) DOI
Asymptotic behaviour of convex and column-convex lattice polygons with fixed area and varying perimeter
Journal of Statistical Mechanics: Theory and Experiment, 2010, P07029 (2010) DOI
Theory of spinodal decomposition assisted crystallization in binary mixtures
The Journal of Chemical Physics, 132(18), 184908 (2010) DOI
Asymptotic behavior of inflated lattice polygons
Journal of Statistical Physics, 131(3), 393-404 (2008) DOI
Phase transitions in pressurized semiflexible polymer rings
Physical Review E, 77(4), 041802 (2008) DOI